Spiral MRI Pulse Sequence
An MRI pulse sequence with spiral read-out gradients and image reconstruction
code. The sequence is written in GE's EPIC pulse programming environmenmt and
is available in precompiled format for 5.x and LX platforms. The
reconstruction software is precompiled C code. You need to have a GE research
agreement to be able to run the sequence on your scanner. To obtain this
package, please send email to Gary Glover (gary@lucas.stanford.edu)
stating your name, research institute, and scanner software version (the
output from the command "whatRev" run on your scanner host will tell you
this information). A licensing agreement (which needs to be signed and faxed
back) and instructions for downloading this software package will be sent to
you.
Diffusion Tensor Image Post-Processing
Post-processing routines for reconstruction of diffusion tensor images.
Precompiled binaries for Unix/Linux are available. Please send email to Mike
Moseley (mike@lucas.stanford.edu) stating your name and research institute.
Instructions for downloading this software package will be sent to you. For
more details, visit
http://rsl.stanford.edu/moseley/tensorcalc
RF Pulse Design
A library of Matlab routines developed by John Pauly
(pauly@mrsrl.stanford.edu) for designing RF pulses using the Shinnar-Le Roux
algorithm. Reference: Pauly J, Le Roux P, Nishimra D, Macovski A. Parameter
relations for the Shinnar-Le Roux selective excitation pulse design algorithm.
IEEE Tr Medical Imaging 1991; 10(1):53-65. Also available is the dualband
RF pulse described in: Schricker AA, Pauly JM, Kurhanewicz J, Swanson MG,
Vigneron DB. Dualband spectral-spatial RF pulses for prostate MR spectroscopic
imaging. Magn Reson Med 2001;46:1079-87.
Tools for GE MR Data
Software developed by Marcus Alley (mtalley@stanford.edu):
- XV 3.10a
extended for use with GE/Dicom image files.
linux |
cygwin |
macosx |
sgi |
sunos
- rdgehdr prints the entire header of any GE
(non-Dicom) data file.
GE 11.x and earlier ::
cygwin |
macosx |
sgi |
sunos
GE 14.x and earlier ::
linux |
windows
- addimghdr adds a GE image header to a
header-less image. Supported formats include 5.x/LX/Dicom. This
routine requires the header of the raw data file ("Pfile") that
generated the image.
GE 11.x and earlier ::
sgi |
cygwin
GE 14.x and earlier ::
linux
- gen2dcm converts from Genesis (e.g.,
5.x/LX) to Dicom image file format.
GE 11.x and earlier ::
cygwin |
macosx |
sgi |
sunos
GE 14.x and earlier ::
linux
- geimgconv: convert between 5.x and LX image
file formats:
linux |
cygwin |
macosx |
sgi |
sunos
Software developed by Thomas Brosnan (brosnan@stanford.edu):
- dcm2gen converts from DICOM to GE Genesis 5.x image file
format (MR images only).
windows |
linux |
mac os x
Software developed by David Clayton (dclayton@stanford.edu):
- Take a snapshot of a GE console screen. Download PERL script:
lxgrab
- Convert rdbm.h and imagedb.h into a Matlab script for reading/writing GE raw data headers. Download PERL script:
gehdr2matlab
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